Mixed inhibition

Mixing inhibition is a kind of enzyme inhibition in which the inhibitor can bind to the enzyme regardless of whether or not the enzyme has already bound the substrate, but the inhibitor has a higher affinity for one state over another.  Because it can be thought of as a conceptual “mixture” of competitive inhibition, in which the inhibitor can only bind the enzyme if the substrate has not already bound, and uncompetitive inhibition, in which the inhibitor can only bind the enzyme if the substrate has already bound, it is given the name “mixed inhibition.” The term “non-competitive inhibitor” refers to an inhibitor that has the same ability to bind to an enzyme regardless of whether or not the enzyme has already bound to the substrate.  In certain circles, non-competitive inhibition is considered to be a subset of mixed inhibition.

If the inhibitor binds to an allosteric site, it is distinct from the active site where the substrate binds, which is why it is called “mixed inhibition.” But not all inhibitors that bind to allosteric sites are mixed inhibitors, as previously stated.

Illustrations from biology

A key enzyme in the process of glucose synthesis is cPEPCK (cytosolic phosphoenolpyruvate carboxykinase), which is responsible for turning oxaloacetate into PEP when the guanosine triphosphate (GTP) is available. As a result of the body’s depletion of glucose during fasting, gluconeogenesis is the only process that takes place during this step. Genistein, an isoflavone present in a variety of plants and known to regulate cPEPCK, is an isoflavone known to regulate cPEPCK. Genestein has been shown to suppress the action of cPEPCK in a laboratory setting for the first time in 2003. This isoflavone was found to lower the level of blood sugar in one investigation, which was conducted on mice. A lower blood sugar level indicates that less glucose is present in the bloodstream, resulting in better health. A fasting patient may experience this because the gluconeogenesis has been stopped, which prevents the body from producing more glucose than it needs. In order to describe genistein’s ability to lower a person’s blood glucose level, it is stated to have anti-diabetic properties.In addition, the mechanism by which genistein inhibited the enzyme cPEPCK was investigated in further detail. To begin, cPEPCK was incubated with 3-Mercaptopropionic acid (3-MPA), a recognised inhibitor of the enzyme, which was added to the mixture. Using this method, it was possible to demonstrate that the mechanism of mixed inhibition was employed to reduce the activity of cPEPCK when it was placed in the presence of genistein.  When cPEPCK catalyses the synthesis of PEP, it takes on a variety of forms. Either unbound, bound to GDP, or bound to GTP can be used to calculate it. On the basis of these varied arrangements, an experiment was carried out to determine the affinity for genistein. In this study, it was discovered that geinstein prefers binding to the cPEPCK with a bound GTP rather than the enzyme with a bound GDP, which was found to be less stable than the former.  This was due to the fact that the GTP-bound cPEPCK revealed a genistein binding site that was significantly longer than previously thought. As previously stated, this binding site corresponds to that of oxaloacetate, which is the enzyme’s designated substrate, but the other configurations did not do so when subjected to genistein. Genistein inhibited cPEPCK through a mechanism that was a combination of competitive and non-competitive inhibition, as demonstrated by this research.

Mixed inhibition equation

Inhibition at a rate of v = (Vmax * S)/[Km(1 + i/Kic) + S(1 + i/Kiu)] is the rate equation for mixed inhibition. It is important to note that there are two Ki values: one for the competitive sections of inhibition and another for the uncompetitive parts of inhibition. You must fit your data to the equation (non-linear fitting to the original data in a basic S-v plot) in order to obtain the parameters vor Vmax, Km, Kiu, and Kis, which are dependent on the concentrations of substrate (S) and inhibitor I respectively. In a good set of data, the lines of an LB plot should (approximately) meet in one point, and you can get a good fit with standard 2-variables-fitting programmes by doing separate fittings for each I (look at how similar the predicted parameters are in each I series; they should be identical in an optimal case), otherwise you need a programme that can handle three variables (S, I and v) in order to get the four parameters you need.

When it comes to the second substrate, you must follow the identical approach (albeit with lower I concentrations at first). Depending on the enzyme, the same form of inhibition by I for this substrate may also occur, or a different type of inhibition may occur, or there may be no inhibition at all (e.g. NAD-dependent dehydrogenases are often inhibited by substrate analogs, which do not affect the reactivity with NAD).

Conclusion

An enzyme known as kallikrein is a type of serine protease that breaks peptide bonds when specific amino acids in a protein have been consumed. All of the human tissues contain the kallikreins, which are numbered from 1 to 15. Its ability to degrade proteins results in the efficient activation of cell surface receptors, which are critical components of many biological signal transduction pathways, as well as the amplification of these signals through cascades of reactions. In addition, because this family of serine proteases is frequently used as a biomarker for disease, they have become a target for drug development. Treatment for disorders such as metastatic cancer and Alzheimer’s disease may be made possible by inhibiting the activity of these kallikrein proteins. A form of plant biflavonoid called fukugetin, or (+)-morelloflavone, was discovered from the fruit of the Garcinia brasiliensis plant. Fukugetin is a biflavonoid that has been shown to have antioxidant properties. After isolating fukugetin, it was mixed with KLK1, KLK2, KLK3, KLK4, KLK5, KLK6, and KLK7 in varied concentrations, with the results showing that they were all inhibitors of KLK1. It was possible to analyse enzyme kinetics by the derivation of the values Km and Vmax as a result of this . The Eadie-Hofstee diagram was plotted using a model of Michaelis-Menten kinetics as a guide. It was verified that fukugetin is a mixed inhibitor, with affinities for both the enzyme alone and the enzyme-substrate complex fluctuating but still present in the mixture . Fukugetin lowered the Vmax while increasing the Km for several KLKs, according to kinetic analysis. For the most part, in competitive inhibition, Vmax remains constant while Km increases, but in non-competitive inhibition, Vmax drops while Km remains constant.  Another finding that is consistent with the effects of a mixed inhibitor is the shift in both of these variables.